mirror of
https://github.com/arcan1s/moldyn.git
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141 lines
4.2 KiB
C
141 lines
4.2 KiB
C
/**
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* @file
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*/
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#include <stdio.h>
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#include <stdlib.h>
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#include "graph.h"
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/**
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* @fn printing_agl
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*/
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int printing_agl (const char *input, const char *output, const int *connect,
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const int num_mol, const int *true_label_mol, const int *num_mol_agl,
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const int *agl, const int *stat, const int max_depth, int *type_agl)
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/**
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* @brief function that prints aglomerates to output file
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* @code
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* printing_agl (input_file, output_file, number_of_molecules, true_label_molecules,
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* num_of_molecules_in_aglomerates, aglomerates, statistic, max_depth,
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* type_of_aglomerate);
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* @endcode
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*
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* @param input input file name
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* @param output output file name
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* @param connect connectivity graph for all molecules
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* @param num_mol number of molecules
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* @param true_label_mol massive of true numbers of molecule for atoms
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* @param num_mol_agl massive of number of molecules in aglomerates
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* @param agl massive of aglomerates
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* @param stat massive of statistic
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* @param max_depth maximum depth for check cycles in graph analyze
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* @param type_agl massive of number of aglomerate types
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*
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* @return 1 - memory error
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* @return 0 - exit without errors
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*/
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{
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int error, i, *iso, j, k, *label_matrix, *matrix;
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FILE *f_out;
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/* iso isomorphic graph in database
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* label_matrix massive of indexes of molecule
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* matrix connectivity graph
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* f_out output file
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*/
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/// <b>Work blocks</b>
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iso = (int *) malloc (max_depth * sizeof (int));
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if (iso == NULL)
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return 1;
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f_out = fopen (output, "a");
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/// <pre> print header </pre>
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fprintf (f_out, "FILE=%s\nSTATISTIC\n| n | N |\n-----------------\n", input);
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for (i=0; i<num_mol; i++)
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if (stat[i] != 0)
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fprintf (f_out, " %7i %7i \n", i+1, stat[i]);
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fprintf (f_out, "-----------------\n");
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/// <pre> print body </pre>
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for (i=0; i<num_mol; i++)
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if (num_mol_agl[i] > 0)
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{
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/// <pre> creating connectivity graph </pre>
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label_matrix = (int *) malloc (num_mol * sizeof (int));
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matrix = (int *) malloc (num_mol_agl[i] * num_mol_agl[i] * sizeof (int));
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if ((matrix == NULL) ||
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(label_matrix == NULL))
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return 1;
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for (j=0; j<num_mol_agl[i]; j++)
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for (k=0; k<num_mol_agl[i]; k++)
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matrix[num_mol_agl[i]*j+k] = 0;
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for (j=0; j<num_mol_agl[i]; j++)
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label_matrix[agl[num_mol*i+j]] = j;
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for (j=0; j<num_mol_agl[i]; j++)
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for (k=j+1; k<num_mol_agl[i]; k++)
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if (connect[num_mol*agl[num_mol*i+j]+agl[num_mol*i+k]] == 1)
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{
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matrix[label_matrix[agl[num_mol*i+j]]*num_mol_agl[i]+label_matrix[agl[num_mol*i+k]]] = 1;
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matrix[label_matrix[agl[num_mol*i+k]]*num_mol_agl[i]+label_matrix[agl[num_mol*i+j]]] = 1;
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}
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/// <pre> graph topology analyze </pre>
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if (max_depth > 0)
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error = graph_analyze (num_mol_agl[i], matrix, max_depth, iso);
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if (error > 0)
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return 1;
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// print class of aglomerate
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fprintf (f_out, "AGL=%i=", num_mol_agl[i]);
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for (j=0; j<max_depth; j++)
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{
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// number of tails
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if (j == 0)
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if (iso[j] > 2)
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// branched
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type_agl[3]++;
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else
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// not branched
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type_agl[2]++;
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// number of cycles
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else if (j == 1)
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if (iso[j] > 0)
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// cycle
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type_agl[1]++;
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else
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// linear
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type_agl[0]++;
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else if (j > 1)
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// number of n_cycles
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type_agl[j+2] += iso[j];
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fprintf (f_out, "%i.", iso[j]);
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}
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fprintf (f_out, "\n");
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for (j=0; j<num_mol_agl[i]; j++)
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{
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fprintf (f_out, "%7i=", true_label_mol[agl[num_mol*i+j]]);
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for (k=0; k<num_mol_agl[i]; k++)
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if (matrix[j*num_mol_agl[i]+k] == 1)
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fprintf (f_out, "%i,", true_label_mol[agl[num_mol*i+k]]);
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fprintf (f_out, "\n");
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}
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/// <pre> free memory </pre>
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free (matrix);
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free (label_matrix);
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}
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fprintf (f_out, "---------------------------------------------------\n");
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fclose (f_out);
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/// <pre> free memory </pre>
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free (iso);
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return 0;
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} |