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+ added dependecies

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+ added oxygen docs building
+ added versioning
* some optimization
This commit is contained in:
arcan1s
2014-01-26 06:17:14 +04:00
parent b7b627fba5
commit 38eb392e32
41 changed files with 2459 additions and 270 deletions
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2
mathmech/trj2pdb/README
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@ -1,6 +1,4 @@
trj2pdb - program that creates PDB file from trajetory snapshot
Version: 1.2.0
License: GPL
Usage:
trj2pdb -i FILENAME -o FILEMANE [ -l LOGFILE ] [ -q ] [ -h ]

1
mathmech/trj2pdb/src/CMakeLists.txt
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@ -15,6 +15,7 @@ message (STATUS "${SUBPROJECT} HEADERS: ${HEADERS}")
# link libraries and compile
add_executable (${MM_PREFIX}${SUBPROJECT} ${SOURCES} ${HEADERS})
add_dependencies (${MM_PREFIX}${SUBPROJECT} ${LIBRARIES})
target_link_libraries (${MM_PREFIX}${SUBPROJECT} ${ADDITIONAL_LIB} ${LIBRARIES})
# install properties

3
mathmech/trj2pdb/src/main.c
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@ -8,6 +8,7 @@
#include <string.h>
#include "add_main.h"
#include <version.h>
#include <mathmech/coords.h>
#include <mathmech/messages.h>
#include <mathmech/print_struct.h>
@ -58,7 +59,7 @@ int main(int argc, char *argv[])
{
sprintf (tmp_str, " mm_trj2pdb\n");
sprintf (tmp_str, "%sProgram for create PDB file from trajectory snapshot\n", tmp_str);
sprintf (tmp_str, "%sVersion : 1.2.0 License : GPL\n", tmp_str);
sprintf (tmp_str, "%sVersion : %s License : GPL\n", tmp_str, PROJ_VERSION);
sprintf (tmp_str, "%s Evgeniy Alekseev aka arcanis\n", tmp_str);
sprintf (tmp_str, "%s E-mail : esalexeev@gmail.com\n\n", tmp_str);
sprintf (tmp_str, "%sUsage:\n", tmp_str);

22
mathmech/trj2pdb/trj2pdb.cmake
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@ -3,26 +3,8 @@ set (SUBPROJECT_BINARY_DIR bin)
set (SUBPROJECT_SOURCE_DIR ${CMAKE_CURRENT_SOURCE_DIR}/src)
# include_path
include_directories (${SUBPROJECT_SOURCE_DIR})
include_directories (${SUBPROJECT_SOURCE_DIR}
${CMAKE_CURRENT_BINARY_DIR}/../)
# executable path
set (EXECUTABLE_OUTPUT_PATH ${SUBPROJECT_BINARY_DIR})
# verbose
set (CMAKE_VERBOSE_MAKEFILE ON)
# flags
if ( WITH_DEBUG_MODE )
add_definitions ( -DDEBUG_MODE=1 )
endif ()
if ( CMAKE_COMPILER_IS_GNUCXX )
set (ADD_CXX_FLAGS "-Wall")
set (CMAKE_CXX_FLAGS "-O0 ${ADD_CXX_FLAGS}")
set (CMAKE_CXX_FLAGS_DEBUG "-g -O0")
set (CMAKE_CXX_FLAGS_RELEASE "-O3 -DNDEBUG")
elseif ( MSVC )
set (ADD_CXX_FLAGS "/W4")
set (CMAKE_CXX_FLAGS "${ADD_CXX_FLAGS}")
else ()
message ("Unknown compiler")
endif ()